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Accession: PRJNA515489 ID: 515489

sponge metagenome

Genomic collection of symbionts associated with Petrosia ficiformis

Assembly and binning of various prokaryotic genomes from a metagenome of the Mediterranean Sea sponge Petrosia ficiformis.
AccessionPRJNA515489
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsponge metagenome[Taxonomy ID: 1163772]
unclassified sequences; metagenomes; organismal metagenomes; sponge metagenome
Publications (total 6)
  • Sizikov S et al., "Characterization of sponge-associated Verrucomicrobia: microcompartment-based sugar utilization and enhanced toxin-antitoxin modules as features of host-associated Opitutales.", Environ Microbiol, 2020 Nov;22(11):4669-4688
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SubmissionRegistration date: 9-Apr-2019
University of Haifa
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)491
WGS master52
Protein Sequences5725
Publications
PubMed3
PMC2
Other datasets
BioSample58
Assembly52
Assembly details:
Assembly levelNumber of Assemblies
51
1
52
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_021296435.1ScaffoldJAGWAK000000000SAMN18299290
277c_5
GCA_021296415.1ScaffoldJAGWAL000000000SAMN18299291
277c_6
GCA_021296345.1ScaffoldJAGWAN000000000SAMN18299293
277c_8
GCA_021296315.1ScaffoldJAGWAO000000000SAMN18299294
277c_9
GCA_021296535.1ScaffoldJAGWAG000000000SAMN18299286
277c_1
GCA_021296515.1ScaffoldJAGWAH000000000SAMN18299287
277c_2
GCA_021296475.1ScaffoldJAGWAJ000000000SAMN18299289
277c_4
GCA_021296485.1ScaffoldJAGWAI000000000SAMN18299288
277c_3
GCA_021296455.1ScaffoldJAGWAM000000000SAMN18299292
277c_7
GCA_021296385.1ScaffoldJAGWAP000000000SAMN18299295
277c_10
GCA_021296375.1ScaffoldJAGWAQ000000000SAMN18299296
277c_11
GCA_021296325.1ScaffoldJAGWAR000000000SAMN18299297
277c_12
GCA_021296295.1ScaffoldJAGWAV000000000SAMN18299301
277c_16
GCA_021296265.1ScaffoldJAGWAT000000000SAMN18299299
277c_14
GCA_021296255.1ScaffoldJAGWAU000000000SAMN18299300
277c_15
GCA_021296065.1ScaffoldJAGWBD000000000SAMN18299309
277c_24
GCA_021296115.1ScaffoldJAGWBC000000000SAMN18299308
277c_23
GCA_004768435.1ScaffoldSRMM00000000SAMN10755957
288cV
GCA_004768385.1ScaffoldSRMN00000000SAMN10755956
277cI
GCA_004768415.1ScaffoldSRMO00000000SAMN10755897
277cV
GCA_021295995.1ScaffoldJAGWBH000000000SAMN18299313
277c_28
GCA_021295695.1ScaffoldJAGWBW000000000SAMN18299328
277c_43
GCA_021295675.1ScaffoldJAGWBY000000000SAMN18299330
277c_45
GCA_021295655.1ScaffoldJAGWBX000000000SAMN18299329
277c_44
GCA_021295755.1ScaffoldJAGWBT000000000SAMN18299325
277c_40
GCA_021295735.1ScaffoldJAGWBU000000000SAMN18299326
277c_41
GCA_021295715.1ScaffoldJAGWBV000000000SAMN18299327
277c_42
GCA_021296135.1ScaffoldJAGWAZ000000000SAMN18299305
277c_20
GCA_021296055.1ScaffoldJAGWBE000000000SAMN18299310
277c_25
GCA_021296025.1ScaffoldJAGWBF000000000SAMN18299311
277c_26
GCA_021296015.1ScaffoldJAGWBG000000000SAMN18299312
277c_27
GCA_021295965.1ScaffoldJAGWBI000000000SAMN18299314
277c_29
GCA_021295955.1ScaffoldJAGWBJ000000000SAMN18299315
277c_30
GCA_021295915.1ScaffoldJAGWBK000000000SAMN18299316
277c_31
GCA_021296095.1ScaffoldJAGWBB000000000SAMN18299307
277c_22
GCA_021296215.1ScaffoldJAGWBA000000000SAMN18299306
277c_21
GCA_021295835.1ScaffoldJAGWBP000000000SAMN18299321
277c_36
GCA_021295815.1ScaffoldJAGWBQ000000000SAMN18299322
277c_37
GCA_021295785.1ScaffoldJAGWBR000000000SAMN18299323
277c_38
GCA_021296175.1ScaffoldJAGWAX000000000SAMN18299303
277c_18
GCA_021296165.1ScaffoldJAGWAW000000000SAMN18299302
277c_17
GCA_021296145.1ScaffoldJAGWAY000000000SAMN18299304
277c_19
GCA_016125975.1ContigJAEFCZ000000000SAMN16580017
PfA
GCA_021295605.1ScaffoldJAGWBZ000000000SAMN18299331
277c_46
GCA_014529575.1ScaffoldJAABVE000000000SAMN12830042
277c
GCA_014529615.1ScaffoldJAABVD000000000SAMN12838318
287ce
GCA_021295775.1ScaffoldJAGWBS000000000SAMN18299324
277c_39
GCA_021295895.1ScaffoldJAGWBM000000000SAMN18299318
277c_33
GCA_021295875.1ScaffoldJAGWBN000000000SAMN18299319
277c_34
GCA_021295855.1ScaffoldJAGWBO000000000SAMN18299320
277c_35
GCA_021295935.1ScaffoldJAGWBL000000000SAMN18299317
277c_32
GCA_021296235.1ScaffoldJAGWAS000000000SAMN18299298
277c_13

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