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Accession: PRJNA514926 ID: 514926

Next Generation Sequencing of Wildtype and Thioredoxin-A knockout of a clinical isolate of Acinetobacter baumannii

See Genome Information for Acinetobacter baumannii
RNA sequencing was used to analyze the transcriptome of a thioredoxin-A knockout of a clinical isolate of Acinetobacter baumannii Overall design: Bacteria was grown to mid-log phase and RNA-extraction and mRNA enrichment was complete on full cell
AccessionPRJNA514926; GEO: GSE125017
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismAcinetobacter baumannii[Taxonomy ID: 470]
Bacteria; Proteobacteria; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii
Publications
  • May HC et al., "Thioredoxin-A is a virulence factor and mediator of the type IV pilus system in Acinetobacter baumannii.", PLoS One, 2019;14(7):e0218505
  • May HC et al., "Thioredoxin Modulates Cell Surface Hydrophobicity in Acinetobacter baumannii.", Front Microbiol, 2019;10:2849
SubmissionRegistration date: 13-Jan-2019
Biology, University of Texas at San Antonio
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed2
PMC2
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases10
Data volume, Mbytes4028

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