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Accession: PRJNA514720 ID: 514720

RNAseq analysis of the N. punctiforme transcriptome during hormogonium development in wild type, and three sigma-factor deletion strains

See Genome Information for Nostoc punctiforme
Change in gene expression for wild-type Nostoc punctiforme ATCC 29133, or three derivative strains with sigma factors deleted, over the time course of hormogonium development Overall design: Total RNA from 3 biological replicates at 0,1,6,12, and 18 hours after hormogonium induction was ribodepleted, converted to cDNA, apended with adapters and sequenced in 6 lanes of a flow cell on an illumina HiSeq 4000 instrument
AccessionPRJNA514720; GEO: GSE124969
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismNostoc punctiforme PCC 73102[Taxonomy ID: 63737]
Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc; Nostoc punctiforme; Nostoc punctiforme PCC 73102
SubmissionRegistration date: 11-Jan-2019
Risser, Biology, University of the Pacific
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments60
Other datasets
BioSample60
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases440
Data volume, Tbytes0.16

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