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Accession: PRJEB29274 ID: 514645

Diversification and orgin of rice CMS genes

Diversification and orgin of rice gametophytic cytoplasmic male sterility (CMS) genes

We identified novel haplotypes of gametophytic CMS related atp6-orf79 structures. More...
AccessionPRJEB29274
Data TypeGenome sequencing and assembly
ScopeMonoisolate
PublicationsHe W et al., "Multicentric origin and diversification of atp6-orf79-like structures reveal mitochondrial gene flows in Oryza rufipogon and Oryza sativa.", Evol Appl, 2020 Oct;13(9):2284-2299
SubmissionRegistration date: 11-Jan-2019
Huazhong Agricultural University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)110
WGS master91
Genomic DNA19
Publications
PubMed1
PMC1
Other datasets
BioSample91
Assembly91
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
91
91
AssemblyLevelWGSBioSampleTaxonomy
GCA_900609465.1ContigUXCK00000000SAMEA1531529
Oryza rufipogon
GCA_900609445.1ContigUXCJ00000000SAMEA1531514
Oryza rufipogon
GCA_900609505.1ContigUXCR00000000SAMEA1531505
Oryza rufipogon
GCA_900609145.1ContigUXBJ00000000SAMEA1531504
Oryza rufipogon
GCA_900609075.1ContigUXAX00000000SAMEA1531498
Oryza rufipogon
GCA_900609435.1ContigUXCI00000000SAMEA1531495
Oryza rufipogon
GCA_900609615.1ContigUXCX00000000SAMEA1531487
Oryza rufipogon
GCA_900609285.1ContigUXBV00000000SAMEA1531469
Oryza rufipogon
GCA_900609255.1ContigUXBT00000000SAMEA1531466
Oryza rufipogon
GCA_900609515.1ContigUXCP00000000SAMEA1531456
Oryza rufipogon
GCA_900609215.1ContigUXBO00000000SAMEA1531451
Oryza rufipogon
GCA_900609245.1ContigUXBP00000000SAMEA1531428
Oryza rufipogon
GCA_900609455.1ContigUXCL00000000SAMEA1531419
Oryza rufipogon
GCA_900609485.1ContigUXCO00000000SAMEA1531403
Oryza rufipogon
GCA_900609265.1ContigUXBQ00000000SAMEA1531381
Oryza rufipogon
GCA_900609635.1ContigUXDC00000000SAMEA1531378
Oryza rufipogon
GCA_900609105.1ContigUXBD00000000SAMEA1531374
Oryza rufipogon
GCA_900609295.1ContigUXBR00000000SAMEA1531365
Oryza rufipogon
GCA_900609385.1ContigUXCD00000000SAMEA1531358
Oryza rufipogon
GCA_900609135.1ContigUXBE00000000SAMEA1531352
Oryza rufipogon
GCA_900609175.1ContigUXBI00000000SAMEA1531341
Oryza rufipogon
GCA_900609645.1ContigUXDD00000000SAMEA1531338
Oryza rufipogon
GCA_900609495.1ContigUXCM00000000SAMEA1531335
Oryza rufipogon
GCA_900609475.1ContigUXCN00000000SAMEA1531329
Oryza rufipogon
GCA_900609275.1ContigUXBU00000000SAMEA1531325
Oryza rufipogon
GCA_900609625.1ContigUXDB00000000SAMEA1531314
Oryza rufipogon
GCA_900609155.1ContigUXBF00000000SAMEA1531313
Oryza rufipogon
GCA_900609305.1ContigUXBS00000000SAMEA1531309
Oryza rufipogon
GCA_900609425.1ContigUXCG00000000SAMEA1531301
Oryza rufipogon
GCA_900609335.1ContigUXBY00000000SAMEA1531298
Oryza rufipogon
GCA_900609575.1ContigUXCW00000000SAMEA1531297
Oryza rufipogon
GCA_900609345.1ContigUXBX00000000SAMEA1531283
Oryza rufipogon
GCA_900609125.1ContigUXBC00000000SAMEA1531275
Oryza rufipogon
GCA_900609235.1ContigUXBN00000000SAMEA1531257
Oryza rufipogon
GCA_900609205.1ContigUXBM00000000SAMEA1531244
Oryza rufipogon
GCA_900609565.1ContigUXCV00000000SAMEA1531234
Oryza rufipogon
GCA_900609405.1ContigUXCC00000000SAMEA1531233
Oryza rufipogon
GCA_900609375.1ContigUXCA00000000SAMEA1531231
Oryza rufipogon
GCA_900609325.1ContigUXCH00000000SAMEA1531223
Oryza rufipogon
GCA_900609665.1ContigUXDG00000000SAMEA1531221
Oryza rufipogon
GCA_900609415.1ContigUXCE00000000SAMEA1531214
Oryza rufipogon
GCA_900609595.1ContigUXDA00000000SAMEA1531207
Oryza rufipogon
GCA_900609395.1ContigUXCF00000000SAMEA1531197
Oryza rufipogon
GCA_900609365.1ContigUXBZ00000000SAMEA1531196
Oryza rufipogon
GCA_900609115.1ContigUXBB00000000SAMEA1531194
Oryza rufipogon
GCA_900609605.1ContigUXCZ00000000SAMEA1531188
Oryza rufipogon
GCA_900609315.1ContigUXBW00000000SAMEA1531165
Oryza rufipogon
GCA_900609095.1ContigUXBA00000000SAMEA1531154
Oryza rufipogon
GCA_900609585.1ContigUXCY00000000SAMEA1531136
Oryza rufipogon
GCA_900609195.1ContigUXBK00000000SAMEA1531132
Oryza rufipogon
GCA_900609555.1ContigUXCT00000000SAMEA1531125
Oryza rufipogon
GCA_900609225.1ContigUXBL00000000SAMEA1531121
Oryza rufipogon
GCA_900609185.1ContigUXBH00000000SAMEA1531118
Oryza rufipogon
GCA_900609355.1ContigUXCB00000000SAMEA1531117
Oryza rufipogon
GCA_900609525.1ContigUXCQ00000000SAMEA1531104
Oryza rufipogon
GCA_900609165.1ContigUXBG00000000SAMEA1531102
Oryza rufipogon
GCA_900609535.1ContigUXCS00000000SAMEA1531088
Oryza rufipogon
GCA_900609545.1ContigUXCU00000000SAMEA1531078
Oryza rufipogon
GCA_900609085.1ContigUXAY00000000SAMEA1531077
Oryza rufipogon
GCA_900609675.1ContigUXDF00000000SAMEA2570041
Oryza sativa
GCA_900609655.1ContigUXDE00000000SAMEA2569994
Oryza sativa
GCA_900609715.1ContigUXDK00000000SAMEA2569925
Oryza sativa
GCA_900609735.1ContigUXDM00000000SAMEA2569731
Oryza sativa
GCA_900610885.1ContigUXHM00000000SAMEA2569702
Oryza sativa
GCA_900609695.1ContigUXDJ00000000SAMEA2569546
Oryza sativa
GCA_900609705.1ContigUXDI00000000SAMEA2569542
Oryza sativa
GCA_900609785.1ContigUXDQ00000000SAMEA2568930
Oryza sativa
GCA_900609765.1ContigUXDS00000000SAMEA2568651
Oryza sativa
GCA_900609755.1ContigUXDO00000000SAMEA2568556
Oryza sativa
GCA_900609745.1ContigUXDL00000000SAMEA2568548
Oryza sativa
GCA_900610895.1ContigUXHO00000000SAMEA2568526
Oryza sativa
GCA_900609725.1ContigUXDN00000000SAMEA2568395
Oryza sativa
GCA_900609795.1ContigUXDR00000000SAMEA2568277
Oryza sativa
GCA_900609775.1ContigUXDP00000000SAMEA2568250
Oryza sativa
GCA_900609955.1ContigUXEI00000000SAMEA2568036
Oryza sativa
GCA_900609925.1ContigUXEF00000000SAMEA2567837
Oryza sativa
GCA_900609935.1ContigUXEG00000000SAMEA2567804
Oryza sativa
GCA_900609865.1ContigUXDY00000000SAMEA2567683
Oryza sativa
GCA_900609855.1ContigUXDZ00000000SAMEA2567677
Oryza sativa
GCA_900609895.1ContigUXED00000000SAMEA2567628
Oryza sativa
GCA_900609685.1ContigUXDH00000000SAMEA2567595
Oryza sativa
GCA_900609805.1ContigUXDU00000000SAMEA2567588
Oryza sativa
GCA_900609945.1ContigUXEH00000000SAMEA2567546
Oryza sativa
GCA_900609875.1ContigUXEA00000000SAMEA2567542
Oryza sativa
GCA_900609825.1ContigUXDV00000000SAMEA2567536
Oryza sativa
GCA_900609845.1ContigUXDW00000000SAMEA2567499
Oryza sativa
GCA_900609835.1ContigUXDX00000000SAMEA2567497
Oryza sativa
GCA_900609815.1ContigUXDT00000000SAMEA2567496
Oryza sativa
GCA_900609915.1ContigUXEE00000000SAMEA2567495
Oryza sativa
GCA_900609905.1ContigUXEB00000000SAMEA2567494
Oryza sativa
GCA_900609885.1ContigUXEC00000000SAMEA2567493
Oryza sativa

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