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Accession: PRJNA514297 ID: 514297

Listeria monocytogenes

GenomeTrakr Project: Thakur Molecular Epidemiology Laboratory, NC State University

See Genome Information for Listeria monocytogenes
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This project is a component of the GenomeTrakr umbrella project for Listeria monocytogenes
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46 additional projects are components of the GenomeTrakr umbrella project for Listeria monocytogenes.
607 additional projects are related by organism.
Whole genome sequencing of cultured Listeria monocytogenes as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.
AccessionPRJNA514297
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismListeria monocytogenes[Taxonomy ID: 1639]
Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes
PublicationsEl Zowalaty ME et al., "Genome Sequence of Listeria innocua Strain MEZLIS26, Isolated from a Goat in South Africa.", Microbiol Resour Announc, 2019 Oct 31;8(44)
SubmissionRegistration date: 9-Apr-2019
FDA Center for Food Safety and Applied Nutrition
Related Resources
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)28
SRA Experiments29
Publications
PubMed1
PMC1
Other datasets
BioSample28
Assembly28
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
28
28
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_005577055.2ContigAADHQU000000000SAMN11604718
MEZLIS26
Listeria innocua
GCA_007852115.1ContigAAJAAO000000000SAMN12370801
NC_511130024
Listeria innocua
GCA_007852095.1ContigAAJAAP000000000SAMN12370802
NC_312130061
Listeria innocua
GCA_006355695.1ContigAAFFOI000000000SAMN12056364
NC_2908140033
Listeria monocytogenes
GCA_006355575.1ContigAAFFOK000000000SAMN12056377
NC_2908140034
Listeria monocytogenes
GCA_004762885.1ContigAABGTO000000000SAMN11310171
NC_608130085
Listeria monocytogenes
GCA_004762905.1ContigAABGTR000000000SAMN11310192
NC_608130089
Listeria monocytogenes
GCA_004762825.1ContigAABGSZ000000000SAMN11310041
NC_511130022
Listeria monocytogenes
GCA_004762805.1ContigAABGTK000000000SAMN11310043
NC_3004140018
Listeria monocytogenes
GCA_004762725.1ContigAABGSX000000000SAMN11310040
NC_312160060
Listeria monocytogenes
GCA_004762765.1ContigAABGTQ000000000SAMN11310168
NC_2108140106
Listeria monocytogenes
GCA_004762745.1ContigAABGTP000000000SAMN11310169
NC_230713062
Listeria monocytogenes
GCA_004762665.1ContigAABGTB000000000SAMN11310042
NC_312130058
Listeria monocytogenes
GCA_004762645.1ContigAABGTF000000000SAMN11310121
NC_608130084
Listeria monocytogenes
GCA_004764065.1ContigAABGTU000000000SAMN11310199
NC_608130088
Listeria monocytogenes
GCA_004764045.1ContigAABGTS000000000SAMN11310196
NC_803130083
Listeria monocytogenes
GCA_004764025.1ContigAABGTT000000000SAMN11310200
NC_608130087
Listeria monocytogenes
GCA_004763965.1ContigAABGTM000000000SAMN11310163
NC_1308130043
Listeria monocytogenes
GCA_004763985.1ContigAABGTI000000000SAMN11310158
NC_2908140035
Listeria monocytogenes
GCA_004763885.1ContigAABGTL000000000SAMN11310118
NC_608130070
Listeria monocytogenes
GCA_004763905.1ContigAABGTH000000000SAMN11310117
NC_608130072
Listeria monocytogenes
GCA_004763945.1ContigAABGTJ000000000SAMN11310159
NC_2108140107
Listeria monocytogenes
GCA_004763925.1ContigAABGTN000000000SAMN11310160
NC_2009110233
Listeria monocytogenes
GCA_004763845.1ContigAABGTD000000000SAMN11310123
NC_608130078
Listeria monocytogenes
GCA_005521755.1ContigAADCHG000000000SAMN11636363
NC_608130075
Listeria monocytogenes
GCA_005523555.1ContigAADCHD000000000SAMN11636369
NC_608130076
Listeria monocytogenes
GCA_011680715.1ContigAAQQPV000000000SAMN14165421
0218195-92-1
Listeria monocytogenes
GCA_011657835.1ContigAAQOYY000000000SAMN14165633
0218195-92-5
Listeria monocytogenes
SRA Data Details
ParameterValue
Data volume, Gbases10
Data volume, Mbytes5859

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