This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA514030; GEO: GSE124864 |
| Type | Umbrella project |
| Publications | Park DE et al., "Author Correction: Merkel cell polyomavirus activates LSD1-mediated blockade of non-canonical BAF to regulate transformation and tumorigenesis.", Nat Cell Biol, 2020 Jun;22(6):752 |
| Submission | Registration date: 9-Jan-2019
James DeCaprio, Medical oncology, Dana-Farber Cancer Institute |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 66 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 66 |
| GEO DataSets | 5 |
LSD1-RCOR2 binding and LSD1 and BRD9 transcriptome analysis in Merkel cell carcinoma cells encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA514036 | Homo sapiens | Genome-wide maps of LSD1-RCOR2 binding in Merkel cell carcinoma cells (James DeCaprio, Medical oncology,...) | | PRJNA590024 | Homo sapiens | Profiling chromatin accessible regions in Merkel cell carcinoma cells (James DeCaprio, Medical oncology,...) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA514037 | Homo sapiens | LSD1 transcriptome analysis in Merkel cell carcinoma (MCC) cell lines (James DeCaprio, Medical oncology,...) | | PRJNA514038 | Homo sapiens | LSD1 and BRD9 transcriptome analysis in the MKL-1 Merkel cell carcinoma (MCC) cell line (James DeCaprio, Medical oncology,...) |
|