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Accession: PRJEB30613 ID: 514013

Investigation of Salmonella foodborne outbreaks in France

Non-parametric approaches to investigate food poisoning outbreaks at the core, accessory and pangenome scales independently of phylogenomic inference applied on Salmonella enterica subsp. enterica serovars Typhimurium and monophasic variants

Based on retrospective epidemiological investigations of four outbreaks of Salmonella enterica subsp. More...
AccessionPRJEB30613
ScopeMonoisolate
PublicationsRadomski N et al., "A Simple and Robust Statistical Method to Define Genetic Relatedness of Samples Related to Outbreaks at the Genomic Scale - Application to Retrospective Salmonella Foodborne Outbreak Investigations.", Front Microbiol, 2019;10:2413
SubmissionRegistration date: 9-Jan-2019
IZSAM
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments192
Publications
PubMed1
PMC1
Other datasets
BioSample192
SRA Data Details
ParameterValue
Data volume, Gbases117
Data volume, Mbytes51692

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