Display Settings:

Format

Send to:

Choose Destination
Accession: PRJDA50789 ID: 50789

Botryococcus braunii BOT22

Botryococcus braunii BOT22 transcriptome project

See Genome Information for Botryococcus braunii
We employed the 454 pyrosequencing technique to analyze the transcriptome of Botryococcus braunii (strain BOT22), which biosynthesizes terpenoid hydrocarbons resembling petroleum.
AccessionPRJDA50789
Data TypeTranscriptome or Gene expression
ScopeMonoisolate
OrganismBotryococcus braunii BOT22[Taxonomy ID: 869301]
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae; Trebouxiophyceae incertae sedis; Elliptochloris clade; Botryococcus; Botryococcus braunii; Botryococcus braunii BOT22
Publications
  • Ioki M et al., "Transcriptome analysis of an oil-rich race B strain of Botryococcus braunii (BOT-22) by de novo assembly of pyrosequencing cDNA reads.", Bioresour Technol, 2012 Apr;109:292-6
  • Ioki M et al., "Modes of hydrocarbon oil biosynthesis revealed by comparative gene expression analysis for race A and race B strains of Botryococcus braunii.", Bioresour Technol, 2012 Apr;109:271-6
SubmissionRegistration date: 27-Jul-2010
National Institute for Environmental Studies
Locus Tag PrefixEEO
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Transcript)27427
SRA Experiments1
Publications
PubMed2
Other datasets
BioSample1
SRA Data Details
ParameterValue
Data volume, Mbases48
Data volume, Mbytes107

Supplemental Content

Recent activity

  • Botryococcus braunii BOT22
    Botryococcus braunii BOT22
    Botryococcus braunii BOT22 transcriptome project
    BioProject
  • JPEel Assembly 1.0
    JPEel Assembly 1.0
    We have assembled the first version of Japanese eel genome as 1.06 Gb with 10,158 scaffolds, N50 over 1.4 Mb and coverage up to 122x from the blood of female yellow eel. By taking 1,211 scaffolds in length larger than 100Kb, these scaffolds can composite 92% of Japanese eel genome.
    BioProject
  • Camellia sinensis var. sinensis cultivar:shuchazao
    Camellia sinensis var. sinensis cultivar:shuchazao
    Camellia sinensis var. sinensis cultivar:shuchazao Genome sequencing
    BioProject
  • Homo sapiens
    Homo sapiens
    Global diversity, population stratification, and selection of human copy number variation
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center