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Accession: PRJNA49615 ID: 49615

sediment metagenome

Metagenome analysis of the anoxic brackish sediment of a shallow lake originated by human activity

Metagenome analysis of the anoxic brackish sediment of a sub-saline shallow lake originated by human activity, namely, plaster extraction (Laguna de Carrizo, Central Spain).

The WGS project can be found using the Project data link.

AccessionPRJNA49615
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsediment metagenome[Taxonomy ID: 749907]
unclassified sequences; metagenomes; ecological metagenomes; sediment metagenome
PublicationsFerrer M et al., "Taxonomic and functional metagenomic profiling of the microbial community in the anoxic sediment of a sub-saline shallow lake (Laguna de Carrizo, Central Spain).", Microb Ecol, 2011 Nov;62(4):824-37
SubmissionRegistration date: 6-Aug-2010
CONSOLIDER
- CSIC, Institute of Catalysis, Spain, Madrid
- IMEDEA
NCBI Links
Locus Tag PrefixLDC
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1579
WGS master1
Genomic DNA601
Protein Sequences3604
Publications
PubMed1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000205665.2ContigADZX00000000SAMN00713648
sediment metagenome

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