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Accession: PRJNA48479 ID: 48479

human metagenome

Human Microbiome Project (HMP) Metagenomic WGS Projects, deeper sequencing of the human microbiome samples: Production Phase

The HMP metagenomes production phase represents the shotgun sequencing of metagenomic DNA extracted from samples taken from multiple body sites across hundreds of human subjects. More...
AccessionPRJNA48479; dbGaP: phs000228
Data TypePhenotype or Genotype
ScopeEnvironment
Organismhuman metagenome[Taxonomy ID: 646099]
unclassified sequences; metagenomes; organismal metagenomes; human metagenome
Publications
  • Tisza MJ et al., "A catalog of tens of thousands of viruses from human metagenomes reveals hidden associations with chronic diseases.", Proc Natl Acad Sci U S A, 2021 Jun 8;118(23)
  • Lloyd-Price J et al., "Strains, functions and dynamics in the expanded Human Microbiome Project.", Nature, 2017 Oct 5;550(7674):61-66
SubmissionRegistration date: 10-May-2010
NIH Human Microbiome Consortium
Related Resources
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)17503
SRA Experiments3481
Protein Sequences854968
Publications
PubMed2
PMC2
Other datasets
BioSample56291
Genotype and Phenotype (dbGaP)1
SRA Data Details
ParameterValue
Data volume, Gbases22,833
Data volume, Tbytes18.15

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