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Accession: PRJNA477853 ID: 477853

Transition between fermentation and respiration determines history-dependent behavior in fluctuating carbon sources (baker's yeast)

See Genome Information for Saccharomyces cerevisiae
Transcriptome of S. cerevisiae in shifts between glucose and maltose media with different re-growth conditions Overall design: Cells are pregrown in maltose, then grown for different durations in glucose and then washed back to maltose
AccessionPRJNA477853; GEO: GSE116246
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismSaccharomyces cerevisiae[Taxonomy ID: 4932]
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae
Publications
  • Jariani A et al., "A new protocol for single-cell RNA-seq reveals stochastic gene expression during lag phase in budding yeast.", Elife, 2020 May 18;9
  • Cerulus B et al., "Transition between fermentation and respiration determines history-dependent behavior in fluctuating carbon sources.", Elife, 2018 Oct 9;7
SubmissionRegistration date: 25-Jun-2018
KU Leuven - VIB Centre for Microbiology, KU Leuven - VIB
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments60
Publications
PubMed2
PMC2
Other datasets
BioSample60
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases35
Data volume, Mbytes23578

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