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Accession: PRJNA476854 ID: 476854

Path-seq identifies essential mycolate remodeling program for mycobacterial adaptation in host cells [RNA-seq]

See Genome Information for Mycolicibacterium smegmatis
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This project is a component of the An essential mycolate remodeling program for mycobacterial adaptation in host cells
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1 additional project is a component of the An essential mycolate remodeling program for mycobacterial adaptation in host cells.
100 additional projects are related by organism.
Comparison of transcriptional differences (RNA-seq) between induced and uninduced overexpression of MSMEG_0916 in Mycobacterium smegmatis Overall design: Cultures of Mycobacterium smegmatis with pDTCF-MSMEG_0916 were grown in the presence or absence of anhydrotetracycline (ATc) for 4 hour and harvested for mRNA expression profiling by Illumina sequencing, in triplicate. More...
AccessionPRJNA476854; GEO: GSE116027
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMycolicibacterium smegmatis[Taxonomy ID: 1772]
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycolicibacterium; Mycolicibacterium smegmatis
PublicationsPeterson EJ et al., "Path-seq identifies an essential mycolate remodeling program for mycobacterial host adaptation.", Mol Syst Biol, 2019 Mar 4;15(3):e8584
SubmissionRegistration date: 20-Jun-2018
Baliga, Institute for Systems Biology
RelevanceUnknown
Project Data:
Resource NameNumber
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Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases4
Data volume, Mbytes2123

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