This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA476698; GEO: GSE115984 |
| Type | Umbrella project |
| Publications | Gdula MR et al., "The non-canonical SMC protein SmcHD1 antagonises TAD formation and compartmentalisation on the inactive X chromosome.", Nat Commun, 2019 Jan 3;10(1):30 |
| Submission | Registration date: 19-Jun-2018
Oxford University |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 108 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 108 |
| GEO DataSets | 8 |
The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome encompasses the following 7 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 3 |
|
| Other | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA476700 | Mus musculus | Hi-C in wild-type and SmcHD1 MommeD1 MEFs, first set (Oxford University) | | PRJNA495638 | Mus musculus | Hi-C in wild-type, SmcHD1 MommeD1mut and somKO MEFs (Oxford University) | | PRJNA503902 | Mus musculus | The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome (Repli-seq) (Oxford University) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA496037 | Mus musculus | chrRNA-seq in wild-type, SmcHD1 MommeD1mut and somKO MEFs (Oxford University) |
|