Integrative analysis of single cell genomics data ... (ID 476600) - BioProject

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Accession: PRJNA476600 ID: 476600

Integrative analysis of single cell genomics data by coupled nonnegative matrix factorizations (RNA-Seq) (house mouse)

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464 scRNA-seq samples generated for the retinoic acid-induced mESC differenation at day 4. More...

Accession	PRJNA476600; GEO: GSE115968
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications	Zeng W et al., "DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data.", Nat Commun, 2019 Oct 10;10(1):4613 Duren Z et al., "Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations.", Proc Natl Acad Sci U S A, 2018 Jul 24;115(30):7723-7728
Submission	Registration date: 18-Jun-2018 Stanford university
Relevance	Model Organism

Project Data:

Parameter	Value
Data volume, Supplementary Mbytes	9

Parameter	Value
Data volume, Gbases	108
Data volume, Mbytes	45116

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Integrative analysis of single cell genomics data by coupled nonnegative matrix ...
Integrative analysis of single cell genomics data by coupled nonnegative matrix factorizations (RNA-Seq)
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