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Accession: PRJNA476592 ID: 476592

Integrated Chromatin Accessibility Mapping and Expression Profiling Enables Functional Annotation of Kidney GWAS Loci

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA476592; GEO: GSE115961
TypeUmbrella project
PublicationsSieber KB et al., "Integrated Functional Genomic Analysis Enables Annotation of Kidney Genome-Wide Association Study Loci.", J Am Soc Nephrol, 2019 Feb 13;
SubmissionRegistration date: 18-Jun-2018
Stamatoyannopoulos, Genome Sciences, Altius Institute / University of Washington
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample18
GEO DataSets3
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3019
SRA Data Details
ParameterValue
Data volume, Gbases100
Data volume, Mbytes44866
Integrated Chromatin Accessibility Mapping and Expression Profiling Enables Functional Annotation of Kidney GWAS Loci encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Epigenomics1
BioProject
accession
OrganismTitle
PRJNA476591Homo sapiensGenome-wide chromatin accessibility profiling of primary human glomerular and kidney cortex tubular outgrowth cultures (Dnase-Seq) (Stamatoyannopoulos, Genome...)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA476596Homo sapiensGenome-wide gene expression profiling of primary human glomerular and kidney cortex tubular outgrowth cultures (RNA-seq) (Stamatoyannopoulos, Genome...)

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