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Accession: PRJNA476591 ID: 476591

Genome-wide chromatin accessibility profiling of primary human glomerular and kidney cortex tubular outgrowth cultures (Dnase-Seq) (human)

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This project is a component of the Integrated Chromatin Accessibility Mapping and Expression Profiling Enables Functional Annotation of Kidney GWAS Loci
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1 additional project is a component of the Integrated Chromatin Accessibility Mapping and Expression Profiling Enables Functional Annotation of Kidney GWAS Loci.
66644 additional projects are related by organism.
We generated primary cultures from mechanically isolated kidney glomeruli (filtration unit of the nephron) which are composed of podocytes and mesangial cells. More...
AccessionPRJNA476591; GEO: GSE115959
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsSieber KB et al., "Integrated Functional Genomic Analysis Enables Annotation of Kidney Genome-Wide Association Study Loci.", J Am Soc Nephrol, 2019 Feb 13;
SubmissionRegistration date: 18-Jun-2018
Stamatoyannopoulos, Genome Sciences, Altius Institute / University of Washington
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2945
SRA Data Details
ParameterValue
Data volume, Gbases68
Data volume, Mbytes33285

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