This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA476370; GEO: GSE115896 |
| Type | Umbrella project |
| Publications | Kloetgen A et al., "Three-dimensional chromatin landscapes in T cell acute lymphoblastic leukemia.", Nat Genet, 2020 Apr;52(4):388-400 |
| Submission | Registration date: 15-Jun-2018
Department of Pathology, NYU School of Medicine |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 79 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 79 |
| GEO DataSets | 7 |
Dynamic 3D chromosomal landscapes in acute leukemia encompasses the following 6 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA476371 | Homo sapiens | Dynamic 3D chromosomal landscapes in acute leukemia [ChIP-Seq] (Department of Pathology,...) |
|
| Other | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA556356 | Homo sapiens | Dynamic 3D chromosomal landscapes in acute leukemia [Hi-C] (Department of Pathology,...) | | PRJNA556355 | Homo sapiens | Dynamic 3D chromosomal landscapes in acute leukemia [HiChIP] (Department of Pathology,...) | | PRJNA579903 | Homo sapiens | Dynamic 3D chromosomal landscapes in acute leukemia [WGS] (Department of Pathology,...) |
|
| Transcriptome or Gene expression | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA476372 | Homo sapiens | Dynamic 3D chromosomal landscapes in acute leukemia [RNA-Seq] (Department of Pathology,...) | | PRJNA476373 | Homo sapiens | Dynamic gene expression in T-ALL following treatment and release of gamma-secretase inhibition [GRO-Seq] (Department of Pathology,...) |
|