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Accession: PRJNA476320 ID: 476320

Comparison of single-cell transcriptomics quality between unfixed cells and cells that were fixed and mock stained according to the RAID procedure (human)

See Genome Information for Homo sapiens
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This project is a component of the RAID allows multiplexed quantification of intracellular (phospho-)proteins and transcriptomes from fixed single cells
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2 additional projects are components of the RAID allows multiplexed quantification of intracellular (phospho-)proteins and transcriptomes from fixed single cells.
66644 additional projects are related by organism.
Cell fixation, permeabilization and antibody staining of could have adverse effects on the quality of single cell transcriptomics data. More...
AccessionPRJNA476320; GEO: GSE115861
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsGerlach JP et al., "Combined quantification of intracellular (phospho-)proteins and transcriptomics from fixed single cells.", Sci Rep, 2019 Feb 6;9(1):1469
SubmissionRegistration date: 15-Jun-2018
Molecular Developmental Biology, Radboud Institute for Molecular Life Sciences
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases11
Data volume, Mbytes4736

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