See
Genome Information for Homo sapiens
We demonstrates that pre-translational mammalian mRNPs fold as linear rod-like structures with no strong propensity for 5' and 3' end interaction.
Overall design: RNA ImmunoPrecipitation and Proximity Ligation in Tandem (RIPPLiT)
| Accession | PRJNA476057; GEO: GSE115788 |
| Scope | Multiisolate |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Publications | - Kovalak C et al., "Deep sequencing of pre-translational mRNPs reveals hidden flux through evolutionarily conserved alternative splicing nonsense-mediated decay pathways.", Genome Biol, 2021 May 3;22(1):132
- Metkar M et al., "Higher-Order Organization Principles of Pre-translational mRNPs.", Mol Cell, 2018 Nov 15;72(4):715-726.e3
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| Submission | Registration date: 14-Jun-2018
Dekker Labaratory, Program in Systems Biology, UMass Medical School |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 6 |
| Publications |
| PubMed | 2 |
| PMC | 2 |
| Other datasets |
| BioSample | 6 |
| GEO DataSets | 1 |