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Accession: PRJNA475978 ID: 475978

Pseudomonas aeruginosa strain:E80 | isolate:E80

Pseudomonas aeruginosa E80 Genome sequencing

See Genome Information for Pseudomonas aeruginosa
genome sequence of a Pseudomonas aeruginosa strain isolated from cystic fibrosis patient that has a 4-bp deletion in lasR gene (@319)
AccessionPRJNA475978
Data TypeGenome sequencing
ScopeMonoisolate
OrganismPseudomonas aeruginosa[Taxonomy ID: 287]
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
Publications
  • Feltner JB et al., "LasR Variant Cystic Fibrosis Isolates Reveal an Adaptable Quorum-Sensing Hierarchy in Pseudomonas aeruginosa.", mBio, 2016 Oct 4;7(5)
  • Rosenfeld M et al., "Baseline characteristics and factors associated with nutritional and pulmonary status at enrollment in the cystic fibrosis EPIC observational cohort.", Pediatr Pulmonol, 2010 Sep;45(9):934-44
Grants
  • "Quorum Sensing in Pseudomonas aeruginosa" (Grant ID R01 GM059026, National Institute of General Medical Sciences)
  • "Translational Research Center to Expedite Novel Therapies in Cystic Fibrosis" (Grant ID P30 DK089507, National Institute of Diabetes and Digestive and Kidney Diseases)
  • "Innovative R&D Team Program" (Grant ID 2013S0340, Guangdong Province)
SubmissionRegistration date: 22-Feb-2019
University of Washington
RelevanceMedical
Locus Tag PrefixDOM02
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)1
SRA Experiments2
Protein Sequences6331
Publications
PubMed2
PMC1
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases3
Data volume, Mbytes1371

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