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Accession: PRJNA475744 ID: 475744

Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis [ATAC-seq] (human)

See Genome Information for Homo sapiens
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This project is a component of the Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis
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2 additional projects are components of the Integrated epigenomic and transcriptomic profiling of terminal human erythropoiesis.
66643 additional projects are related by organism.
In vitro cultured CD34+ derived erythroblasts were sorted using surface markers and processed using ATAC-seq Overall design: Biological replicates (3 or 4 per population) were processed across 2-3 biological donors for 8 sorted populations for ATAC-seq
AccessionPRJNA475744; GEO: GSE115672
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsLudwig LS et al., "Transcriptional States and Chromatin Accessibility Underlying Human Erythropoiesis.", Cell Rep, 2019 Jun 11;27(11):3228-3240.e7
SubmissionRegistration date: 12-Jun-2018
Broad Institute
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments28
Publications
PubMed1
PMC1
Other datasets
BioSample28
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases53
Data volume, Mbytes20506

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