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Accession: PRJNA475583 ID: 475583

Genome-wide fork-collapse sites in MDA-MB-231 cells from ATR inhibition [human] (human)

See Genome Information for Homo sapiens
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This project is a component of the Genome-wide fork-collapse sites in MEF and MDA-MB-231 from ATR inhibition
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2 additional projects are components of the Genome-wide fork-collapse sites in MEF and MDA-MB-231 from ATR inhibition.
66644 additional projects are related by organism.
Transient obstruction of DNA polymerase progression activates the ATR checkpoint kinase, which suppresses fork breakage, strand resection, and RPA accumulation. More...
AccessionPRJNA475583; GEO: GSE115623
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsShastri N et al., "Genome-wide Identification of Structure-Forming Repeats as Principal Sites of Fork Collapse upon ATR Inhibition.", Mol Cell, 2018 Oct 18;72(2):222-238.e11
SubmissionRegistration date: 11-Jun-2018
Eric Brown, Cancer Biology, University of Pennsylvania
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases43
Data volume, Mbytes17668

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