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Accession: PRJNA475577 ID: 475577

BRG1 occupancy profiling by high throughput sequencing from control and PTEN knockdown 22RV-1 cells (human)

See Genome Information for Homo sapiens
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This project is a component of the SWI/SNF Chromatin Remodeling Factor BRG1 is Synthetic Required for PTEN-deficient Prostate Cancer
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2 additional projects are components of the SWI/SNF Chromatin Remodeling Factor BRG1 is Synthetic Required for PTEN-deficient Prostate Cancer.
66643 additional projects are related by organism.
To identify the downstream targets and pathways mediated by BRG1, chromatin immunoprecipitation followed by sequencing (ChIP–seq) was performed in control and PTEN-knockdown 22RV-1 cells. More...
AccessionPRJNA475577; GEO: GSE115615
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsDing Y et al., "Chromatin remodeling ATPase BRG1 and PTEN are synthetic lethal in prostate cancer.", J Clin Invest, 2019 Feb 1;129(2):759-773
SubmissionRegistration date: 11-Jun-2018
Laboratory of Tumor Progression and Metastasis, Institute of Health Sciences, Shanghai Institute for Biological Sciences, Chinese Academy of Sciences
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Publications
PubMed1
PMC1
Other datasets
BioSample3
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes243
SRA Data Details
ParameterValue
Data volume, Gbases9
Data volume, Mbytes3500

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