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Accession: PRJNA475545 ID: 475545

Light releases the TCP4-SAUR16/50 transcription module from the repression of PIF3 to facilitate cotyledon opening during de-etiolation [RNA-seq] (thale cress)

See Genome Information for Arabidopsis thaliana
Etiolated Arabidopsis seedlings open their cotyledons and halt rapid elongation of hypocotyl when exposed to light (de-etiolation). More...
AccessionPRJNA475545; GEO: GSE115584
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsDong J et al., "The Transcription Factors TCP4 and PIF3 Antagonistically Regulate Organ-Specific Light Induction of SAUR Genes to Modulate Cotyledon Opening during De-Etiolation in Arabidopsis.", Plant Cell, 2019 May;31(5):1155-1170
SubmissionRegistration date: 11-Jun-2018
MCDB, yale university
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Publications
PubMed1
PMC1
Other datasets
BioSample3
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases19
Data volume, Mbytes8086

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