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Accession: PRJNA475143 ID: 475143

Allelic specificity of IGH-DUX4 translocation in acute lymphoblastic leukemia (ALL) [ATAC-seq] (human)

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This project is a component of the Allelic specificity of IGH-DUX4 translocation in acute lymphoblastic leukemia (ALL)
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4 additional projects are components of the Allelic specificity of IGH-DUX4 translocation in acute lymphoblastic leukemia (ALL).
66644 additional projects are related by organism.
In Nalm6, allelic imbalance was found at IGH-DUX4 translocation locus from ATAC-seq data. Overall design: ATAC-seq
AccessionPRJNA475143; GEO: GSE115482
Data TypeEpigenomics
ScopeMonoisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsTian L et al., "Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia.", Nat Commun, 2019 Jun 26;10(1):2789
SubmissionRegistration date: 7-Jun-2018
St. Jude Children's Research Hospital
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample1
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes875
SRA Data Details
ParameterValue
Data volume, Gbases18
Data volume, Mbytes4772

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