Rhizopus oryzae (ID 475137) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJNA475137 ID: 475137

Rhizopus oryzae

Rhizopus oryzae Genome sequencing and assembly

Whole genome sequencing for clinical and environmental Rhizopus isolates.

Accession	PRJNA475137
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Nguyen MH et al., "Genetic diversity of clinical and environmental Mucorales isolates obtained from an investigation of mucormycosis cases among solid organ transplant recipients.", Microb Genom, 2020 Dec;6(12)
Submission	Registration date: 7-Jun-2018 J Craig Venter Institute
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	387220
WGS master	57
SRA Experiments	57
Protein Sequences	895066
Publications
PubMed	1
PMC	1
Other datasets
BioSample	114
Assembly	57

Assembly details:

Download

Assembly level

Number of Assemblies

Scaffold

Total

57
57

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_011763645.1	JAASGZ000000000		SAMN14162329	GL39	Rhizopus arrhizus
GCA_011763775.1	JAANIT000000000		SAMN14162338	GL16	Rhizopus arrhizus
GCA_011764265.1	JAANRE000000000		SAMN14162322	GL5	Rhizopus arrhizus
GCA_011764225.1	JAANRQ000000000		SAMN14162309	GL4	Rhizopus arrhizus
GCA_011764185.1	JAANRA000000000		SAMN14162344	GL21	Rhizopus arrhizus
GCA_011764125.1	JAANQV000000000		SAMN14162349	GL8	Rhizopus arrhizus
GCA_011764055.1	JAANQS000000000		SAMN14162352	GL1	Rhizopus arrhizus
GCA_011764025.1	JAANQT000000000		SAMN14162351	GL11	Rhizopus arrhizus
GCA_011763995.1	JAANJE000000000		SAMN14162310	GL9	Rhizopus arrhizus
GCA_011763975.1	JAANJF000000000		SAMN14162323	GL48	Rhizopus arrhizus
GCA_011763955.1	JAANJD000000000		SAMN14162324	GL36	Rhizopus arrhizus
GCA_011763935.1	JAANJC000000000		SAMN14162325	GL60	Rhizopus arrhizus
GCA_011763875.1	JAANIZ000000000		SAMN14162332	GL20	Rhizopus arrhizus
GCA_011801555.1	JAANRX000000000	1	SAMN14162302	GL52	Rhizopus arrhizus
GCA_011801505.1	JAANRU000000000	1	SAMN14162305	GL44	Rhizopus arrhizus
GCA_011801575.1	JAANRW000000000	1	SAMN14162303	GL34	Rhizopus arrhizus
GCA_011801495.1	JAANRV000000000	1	SAMN14162304	GL45	Rhizopus arrhizus
GCA_011801605.1	JAANRT000000000	1	SAMN14162306	GL56	Rhizopus arrhizus
GCA_011801305.1	JAANRS000000000	1	SAMN14162307	GL46	Rhizopus arrhizus
GCA_011801385.1	JAANRR000000000	1	SAMN14162308	GL29	Rhizopus arrhizus
GCA_011801335.1	JAANRP000000000	1	SAMN14162311	GL22	Rhizopus arrhizus
GCA_011801055.1	JAANRO000000000	1	SAMN14162312	GL31	Rhizopus arrhizus
GCA_011801785.1	JAANQR000000000	1	SAMN14162353	GL10	Rhizopus arrhizus
GCA_011801035.1	JAANRN000000000	1	SAMN14162313	GL38	Rhizopus arrhizus
GCA_011800955.1	JAANRM000000000	1	SAMN14162314	GL40	Rhizopus arrhizus
GCA_011800985.1	JAANRL000000000	1	SAMN14162315	GL53	Rhizopus arrhizus
GCA_011801815.1	JAANQU000000000	1	SAMN14162350	GL17	Rhizopus arrhizus
GCA_011801675.1	JAANQW000000000	1	SAMN14162348	GL26	Rhizopus arrhizus
GCA_011801725.1	JAANQX000000000	1	SAMN14162347	GL30	Rhizopus arrhizus
GCA_011801645.1	JAANRB000000000	1	SAMN14162328	GL49	Rhizopus arrhizus
GCA_011801705.1	JAANQY000000000	1	SAMN14162346	GL2	Rhizopus arrhizus
GCA_011952045.1	JAANRH000000000	1	SAMN14162319	GL6	Rhizopus arrhizus
GCA_011952115.1	JAANRI000000000	1	SAMN14162318	GL7	Rhizopus arrhizus
GCA_011952175.1	JAANRK000000000	1	SAMN14162316	GL32	Rhizopus arrhizus
GCA_011952145.1	JAANRJ000000000	1	SAMN14162317	GL37	Rhizopus arrhizus
GCA_011950985.1	JAANRF000000000	1	SAMN14162321	GL43	Rhizopus arrhizus
GCA_011951285.1	JAANRG000000000	1	SAMN14162320	GL42	Rhizopus arrhizus
GCA_011951295.1	JAANRC000000000	1	SAMN14162327	GL3	Rhizopus arrhizus
GCA_011950945.1	JAANRD000000000	1	SAMN14162326	GL41	Rhizopus arrhizus
GCA_011763855.1	JAANJA000000000		SAMN14162331	GL51	Rhizopus delemar
GCA_011763835.1	JAANIX000000000		SAMN14162334	GL55	Rhizopus delemar
GCA_011763815.1	JAANIU000000000		SAMN14162337	GL24	Rhizopus delemar
GCA_011763915.1	JAANJB000000000		SAMN14162330	GL54	Rhizopus delemar
GCA_011764145.1	JAANQZ000000000		SAMN14162345	GL13	Rhizopus delemar
GCA_011763735.1	JAANIS000000000		SAMN14162339	GL23	Rhizopus delemar
GCA_011763715.1	JAANIR000000000		SAMN14162340	GL12	Rhizopus delemar
GCA_011763695.1	JAANIQ000000000		SAMN14162341	GL14	Rhizopus delemar
GCA_011763895.1	JAANIY000000000		SAMN14162333	GL25	Rhizopus delemar
GCA_011763795.1	JAANIV000000000		SAMN14162336	GL50	Rhizopus delemar
GCA_011763755.1	JAANIW000000000		SAMN14162335	GL62	Rhizopus delemar
GCA_011763605.1	JAANIO000000000		SAMN14162343	GL27	Rhizopus delemar
GCA_011763585.1	JAANIP000000000		SAMN14162342	GL15	Rhizopus delemar
GCA_011763565.1	JAANIN000000000		SAMN14162354	GL28	Rhizopus microsporus
GCA_011763475.1	JAANIM000000000		SAMN14162356	GL61	Rhizopus microsporus
GCA_011762635.1	JAANIK000000000		SAMN14162358	GL58	Rhizopus microsporus
GCA_011762625.1	JAANIL000000000		SAMN14162357	GL35	Rhizopus microsporus
GCA_011764045.1	JAANQQ000000000		SAMN14162355	GL19	Rhizopus microsporus

SRA Data Details

Parameter	Value
Data volume, Gbases	240
Data volume, Tbytes	0.10

Supplemental Content

Related information

Assembly
All related Assemblies
BioSample
All related BioSamples
Full text in PMC
PMC links
Genome
Related Genomes
Nucleotide
Related Nucleotide entry
Protein
Related Proteins
PubMed
PubMed Links
SRA
All related SRA Experiments
WGS master
Link to WGS master record(s)

Recent activity

Clear Turn Off Turn On

Rhizopus oryzae
Rhizopus oryzae
Rhizopus oryzae Genome sequencing and assembly

BioProject
freshwater metagenome
freshwater metagenome
Sorted cell/s from McNutts Creek water, Athens, Georgia, United States - Uncultured microbe JGI Ottese.MC11.SYBR.01.G13 metagenome

BioProject
marine metagenome
marine metagenome
Marine microbial communities from Saanich Inlet, British Columbia, Canada - GOPP-49-E15 metagenome

BioProject
Homo sapiens
Homo sapiens
Epigenetic profiling of Juvenile Idiopathic Arthritits (JIA) patients

BioProject
miRNA expression profile and function analysis in psoriasis lesional skin and no...
miRNA expression profile and function analysis in psoriasis lesional skin and normal control of human
miRNA expression profile and function analysis in psoriasis lesional skin and normal control of human

BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

BioProject

Result Filters

Display Settings:

Send to:

Rhizopus oryzae

Rhizopus oryzae Genome sequencing and assembly

Supplemental Content

Related information

Recent activity

Simple NCBI Directory

Getting Started

Resources

Popular

Featured

NCBI Information