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Accession: PRJNA475117 ID: 475117

High density analysis of the tailing and trimming patterns of RISC-cleaved MYB33 and SPL13 transcripts in Arabidopsis heso1 and urt1 mutants (thale cress)

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Using 3' RACEseq method, we compared the tailing and nibbling patterns of RISC-cleaved MYB33 and SPL13 transcripts between wild-type plants and mutant plants depleted for the terminal uridylyltransferases (TUTases) HESO1 and URT1. More...
AccessionPRJNA475117; GEO: GSE115470
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsZuber H et al., "Respective Contributions of URT1 and HESO1 to the Uridylation of 5' Fragments Produced From RISC-Cleaved mRNAs.", Front Plant Sci, 2018;9:1438
SubmissionRegistration date: 7-Jun-2018
IBMP, CNRS
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RelevanceModel Organism
Project Data:
Resource NameNumber
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Sequence data
SRA Experiments22
Publications
PubMed1
PMC1
Other datasets
BioSample22
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes9
SRA Data Details
ParameterValue
Data volume, Gbases3
Data volume, Mbytes1452

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