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Genome Information for Mus musculus
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1 additional project is a component of the Expression and transcript isoform profiling of reprogramming cells expressing a Sox2 mutant lacking a putative RNA binding motif.
Total RNA was extracted at different stages of somatic cell reprogramming of OG2-MEFs to induced pluripotent stem cells to analyse the effect of a Sox2 mutant lacking a putative RNA binding motif on genes expression and post-transcriptional processing
Overall design: Expression profiling by high throughput sequencing of reprogramming cells.
| Accession | PRJNA475064; GEO: GSE115451 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus |
| Publications | Hou L et al., "Concurrent binding to DNA and RNA facilitates the pluripotency reprogramming activity of Sox2.", Nucleic Acids Res, 2020 Apr 17;48(7):3869-3887 |
| Submission | Registration date: 7-Jun-2018
Miguel, South China Institute for Stem Cell Biology and Regenerative Medicine Key Laboratory of Regenerative Biology, CAS, Guangzhou Institutes of Biomedicine and Health,Chinese Academy of Sciences |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 18 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 18 |
| GEO DataSets | 1 |