This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA474950; GEO: GSE115435 |
| Type | Umbrella project |
| Publications | Platanitis E et al., "A molecular switch from STAT2-IRF9 to ISGF3 underlies interferon-induced gene transcription.", Nat Commun, 2019 Jul 2;10(1):2921 |
| Submission | Registration date: 6-Jun-2018
Department of Microbiology, Immunobiology and Genetics, University of Vienna |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 85 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 85 |
| GEO DataSets | 7 |
Irf9 function in immunity in mouse encompasses the following 6 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA526485 | Homo sapiens | STAT1, STAT2 and IRF9 transcription factor binding analysis in wild type human monocytic THP1 cells in response to type I interferons (Department of Microbiology,...) | | PRJNA474952 | Mus musculus | STAT1, STAT2 and IRF9 transcription factor binding analysis in wild type and Irf9-/- bone marrow derived macrophages in response to type I and type II interferons (Department of Microbiology,...) | | PRJNA526476 | Mus musculus | STAT1, STAT2 and IRF9 transcription factor binding analysis in wild type mouse embryonic fibroblasts (MEF) in response to type I interferons (Department of Microbiology,...) |
|
| Transcriptome or Gene expression | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA526483 | Homo sapiens | Transcription profile analysis of wild type and Irf9-/- human monocytic THP1 cells in response to type I interferons (Department of Microbiology,...) | | PRJNA474951 | Mus musculus | Transcription profile analysis of wild type and Irf9-/- bone marrow derived macrophages in response to type I and type II interferons (Department of Microbiology,...) | | PRJNA526480 | Mus musculus | Transcription profile analysis of wild type and Irf9-/- mouse embryonic fibroblasts (MEF) in response to type I interferons (Department of Microbiology,...) |
|