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Accession: PRJNA474949 ID: 474949

Streptococcus pyogenes strain:M1T1 5448

Tn-seq analysis of M1T1 5448 Group A Streptococcus (GAS) genetic fitness under Metal Stress Conditions

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To identify genes important for GAS (Streptococcus pyogenes) fitness in the presence the metals Zinc (Zn) and Copper (Cu), an M1T1 5448 master library of Krmit transposon insertions was grown in a defined modified RPMI (mRPMI) media either alone, or in the presence of low (10 µM) and high (20 µM) Zn/Cu for second (T2) or third (T3) overnight passage at 37°C. More...
AccessionPRJNA474949
Data TypeRaw sequence reads
ScopeMonoisolate
OrganismStreptococcus pyogenes[Taxonomy ID: 1314]
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pyogenes
SubmissionRegistration date: 6-Jun-2018
Host-Pathogen Genomics Laboratory - University of Maryland (HPGL-UMD)
RelevanceMedical
Locus Tag PrefixDNF05
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments26
Other datasets
BioSample26
SRA Data Details
ParameterValue
Data volume, Gbases17
Data volume, Mbytes8097

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