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Accession: PRJNA474542 ID: 474542

Single cell RNA seq for Ciona late tailbud embryos (vase tunicate)

See Genome Information for Ciona intestinalis
We applied single cell RNA seq with 10x genomics platform to study the cell identity change in Ciona late tailbud embryos. More...
AccessionPRJNA474542; GEO: GSE115331
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismCiona intestinalis[Taxonomy ID: 7719]
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis
PublicationsHorie R et al., "Shared evolutionary origin of vertebrate neural crest and cranial placodes.", Nature, 2018 Aug;560(7717):228-232
SubmissionRegistration date: 4-Jun-2018
Levine Lab, Lewis-Sigler Institute for Integrative Genomics, Princeton University
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes590
SRA Data Details
ParameterValue
Data volume, Gbases21
Data volume, Mbytes11637

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