Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA474491 ID: 474491

Genome-wide analysis of DNA methylation in KRAB-ZFP cluster KO ES cells (house mouse)

See Genome Information for Mus musculus
Navigate Up
This project is a component of the Retrotransposon reactivation and mobilization upon deletions of megabase-scale KRAB zinc finger gene clusters in mice
Navigate Across
4 additional projects are components of the Retrotransposon reactivation and mobilization upon deletions of megabase-scale KRAB zinc finger gene clusters in mice.
47588 additional projects are related by organism.
We report a retrotransposon-specific loss of CpG methylation in chromosome 4 KRAB-ZFP cluster (Chr4-cl) KO ES cells that are cultivated in conditions that induce DNA hypomethylation. More...
AccessionPRJNA474491; GEO: GSE115289
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsWolf G et al., "KRAB-zinc finger protein gene expansion in response to active retrotransposons in the murine lineage.", Elife, 2020 Jun 1;9
SubmissionRegistration date: 4-Jun-2018
Macfarlan lab, NICHD, NIH
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes102
SRA Data Details
ParameterValue
Data volume, Gbases14
Data volume, Mbytes7038

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center