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Accession: PRJNA474443 ID: 474443

Expression and transcript isoform profiling of reprogramming cells expressing a Sox2 mutant lacking a putative RNA binding motif [PAR-CLIP] (human)

See Genome Information for Homo sapiens
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This project is a component of the Expression and transcript isoform profiling of reprogramming cells expressing a Sox2 mutant lacking a putative RNA binding motif
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1 additional project is a component of the Expression and transcript isoform profiling of reprogramming cells expressing a Sox2 mutant lacking a putative RNA binding motif.
66644 additional projects are related by organism.
PAR-CLIP sequencing experiments for SOX2 in HEK293T cells. Overall design: Perform 2 independent PAR-CLIP sequencing experiments for SOX2 in HEK293T cells.
AccessionPRJNA474443; GEO: GSE115273
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsHou L et al., "Concurrent binding to DNA and RNA facilitates the pluripotency reprogramming activity of Sox2.", Nucleic Acids Res, 2020 Apr 17;48(7):3869-3887
SubmissionRegistration date: 4-Jun-2018
Miguel, South China Institute for Stem Cell Biology and Regenerative Medicine Key Laboratory of Regenerative Biology, CAS, Guangzhou Institutes of Biomedicine and Health,Chinese Academy of Sciences
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments2
Publications
PubMed1
PMC1
Other datasets
BioSample2
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases5
Data volume, Mbytes3119

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