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Accession: PRJNA473838 ID: 473838

Single cell transcriptomic analysis (InDrops) of mouse FoxP3+ regulatory CD4+ T cells isolated from spleen and muscle after injury (house mouse)

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This project is a component of the Single cell transcriptomic analysis of mouse FoxP3- CD4+ Tconv cells and FoxP3+ regulatory CD4+ T cells isolated from secondary lymphoid organs, colon, muscle, visceral adipose tissue
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9 additional projects are components of the Single cell transcriptomic analysis of mouse FoxP3- CD4+ Tconv cells and FoxP3+ regulatory CD4+ T cells isolated from secondary lymphoid organs, colon, muscle, visceral adipose tissue.
47588 additional projects are related by organism.
Single cell transcriptomic analysis (InDrops) of mouse FoxP3+ regulatory CD4+ T cells isolated from spleen and muscle after injury Overall design: Single cells were sorted by flow cytometry for single cell RNAseq library preparation (InDrops)
AccessionPRJNA473838; GEO: GSE115125
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsZemmour D et al., "Single-cell gene expression reveals a landscape of regulatory T cell phenotypes shaped by the TCR.", Nat Immunol, 2018 Mar;19(3):291-301
SubmissionRegistration date: 30-May-2018
CBDM, Microbiology and Immunobiology, Harvard Medical School
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1627
Publications
PubMed1
PMC1
Other datasets
BioSample1627
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases6
Data volume, Mbytes2674

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