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Accession: PRJNA473498 ID: 473498

Escherichia coli strain:ZRUEC11

Draft genome sequence of an MDR and highly virulent Uropathogenic E. coli strain from Pakistan

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7503 additional projects are related by organism.
UPEC is a the leading cause of UTI worldwide. It is increasingly becoming resistant to the regime of antibiotics recommended against it. More...
AccessionPRJNA473498
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
PublicationsRafaque Z et al., "Draft genome sequence of a multidrug-resistant CTX-M-15 β-lactamase-producing uropathogenic Escherichia coli isolate (ST131-O25b-H30) from Pakistan exhibiting high potential virulence.", J Glob Antimicrob Resist, 2018 Dec;15:164-165
Grants
  • "HEC Indigenous Fellowship" (Grant ID 213-53931-2BM2-093, Higher Education Commission, Pakistan)
  • "Commonwealth split-site PhD for developing countries" (Grant ID PKCN-2017-215, Commonwealth Scholarship Commission)
SubmissionRegistration date: 22-Oct-2018
University of Reading
RelevanceMedical
Locus Tag PrefixDL718
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)137
WGS master1
SRA Experiments1
Protein Sequences5311
Publications
PubMed1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_003668735.1ContigQICE00000000SAMN09274370
Escherichia coli
SRA Data Details
ParameterValue
Data volume, Mbases428
Data volume, Mbytes285

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