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Accession: PRJNA473494 ID: 473494

ATAC-seq reveals GATA-1- and heme-dependent chromatin targeting in erythroid cells. (house mouse)

See Genome Information for Mus musculus
CRISPR/Cas9-mediated ablation of two Alas2 intronic cis-elements in G1E-ER-GATA1 cells strongly reduced GATA-1-induced Alas2 transcription, heme biosynthesis, and GATA-1 regulation of other vital constituents of the erythroid cell transcriptome. More...
AccessionPRJNA473494; GEO: GSE114996
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsTanimura N et al., "GATA/Heme Multi-omics Reveals a Trace Metal-Dependent Cellular Differentiation Mechanism.", Dev Cell, 2018 Sep 10;46(5):581-594.e4
SubmissionRegistration date: 29-May-2018
Bresnick Lab, Cell and Regenerative Biology, University of Wisconsin Madison
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments18
Publications
PubMed1
PMC1
Other datasets
BioSample18
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3847
SRA Data Details
ParameterValue
Data volume, Gbases25
Data volume, Mbytes10498

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