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Accession: PRJNA473149 ID: 473149

Transcriptome analysis of the glioma stem cells infected with ZIKV (human)

See Genome Information for Homo sapiens
Glioma stem cells derived from patient samples were infected with ZIKV at MOI of 1 for 48hrs, total RNA was extracted and deep sequenced to compare the gene expression profiles between mock and ZIKV infected cells Overall design: Triplicated 3 Mock samples and 3 ZIKV-infected samples were sequneced and compared
AccessionPRJNA473149; GEO: GSE114907
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsChen Q et al., "Treatment of Human Glioblastoma with a Live Attenuated Zika Virus Vaccine Candidate.", mBio, 2018 Sep 18;9(5)
SubmissionRegistration date: 25-May-2018
MaF Lab, Suzhou Institute of Systems Medicine, CAMS
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases69
Data volume, Mbytes29961

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