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Accession: PRJEB21744 ID: 473095

Whole Genome sequencing of french isolates and epidemiology

Whole genome sequencing for B. pertussis epidemiology : Core genome MLST enables precise B. pertussis epidemiology

We defined a core genome multilocus sequence typing (cgMLST) scheme. We report that the resolutive power of cgMLST is sufficient to define epidemiologically-related groups of isolates and to distinguish them from temporally and geographically co-circulating isolates.
AccessionPRJEB21744
ScopeMonoisolate
SubmissionRegistration date: 25-May-2018
INSTITUT PASTEUR DE PARIS
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments55
Other datasets
BioSample55
SRA Data Details
ParameterValue
Data volume, Gbases31
Data volume, Mbytes13266

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