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Accession: PRJNA472981 ID: 472981

West Nile virus

West Nile virus genomic data from California

See Genome Information for West Nile virus
We are sequencing West Nile virus from California, with an emphasis on San Diego, Kern, and Sacramento/Yolo counties, to understand how 1) the virus spreads between regions, 2) is maintained locally between seasons, and 3) the factors that promote local outbreaks.
AccessionPRJNA472981
Data TypeGenome sequencing
ScopeMultiisolate
OrganismWest Nile virus[Taxonomy ID: 11082]
Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; West Nile virus
SubmissionRegistration date: 24-May-2018
The Scripps Research Institute
Related Resources
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic RNA)431
SRA Experiments745
Protein Sequences437
Other datasets
BioSample746
SRA Data Details
ParameterValue
Data volume, Gbases87
Data volume, Mbytes28881

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