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Accession: PRJNA472981 ID: 472981

West Nile virus

West Nile virus genomic data from California

See Genome Information for West Nile virus
We are sequencing West Nile virus from California, with an emphasis on San Diego, Kern, and Sacramento/Yolo counties, to understand how 1) the virus spreads between regions, 2) is maintained locally between seasons, and 3) the factors that promote local outbreaks.
Data TypeGenome sequencing
OrganismWest Nile virus[Taxonomy ID: 11082]
Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus nilense; West Nile virus
SubmissionRegistration date: 24-May-2018
The Scripps Research Institute
Related Resources
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic RNA)1178
SRA Experiments745
Protein Sequences1188
Other datasets
SRA Data Details
Data volume, Gbases87
Data volume, Mbytes28881

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