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Accession: PRJNA472700 ID: 472700

ChIP-seq in human tonsilar Naïve and Germinal Center B cells and DLBCL cell lines

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA472700; GEO: GSE114804
TypeUmbrella project
PublicationsAgirre X et al., "Long non-coding RNAs discriminate the stages and gene regulatory states of human humoral immune response.", Nat Commun, 2019 Feb 18;10(1):821
Grants
  • "Use of chromatin accessibility maps to discover novel regulatory circuits in aggressive B cell lymphomas" (Grant ID F31 CA220981, National Cancer Institute)
SubmissionRegistration date: 23-May-2018
Weill Cornell Medicine
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments41
Publications
PubMed1
PMC1
Other datasets
BioSample41
GEO DataSets3
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes6629
SRA Data Details
ParameterValue
Data volume, Gbases221
Data volume, Tbytes0.12
ChIP-seq in human tonsilar Naïve and Germinal Center B cells and DLBCL cell lines encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Epigenomics1
BioProject
accession
OrganismTitle
PRJNA472701Homo sapiensLong non-coding RNAs discriminate the stages and gene regulatory states of the human humoral immune response (Weill Cornell Medicine)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA472759Homo sapiensLong non-coding RNAs discriminate the stages and gene regulatory states of the human humoral immune response (RNA-Seq) (Melnick Lab & Mason Lab,...)

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