Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA47265 ID: 47265

Escherichia coli MS 182-1

Demonstration Project Reference Genome for Human Microbiome Project

See Genome Information for Escherichia coli
Navigate Up
This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)
This project is a component of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP)
Navigate Across
7503 additional projects are related by organism.
2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).
28 additional projects are components of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP).

This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).

AccessionPRJNA47265
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismEscherichia coli MS 182-1[Taxonomy ID: 749545]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli MS 182-1
SubmissionRegistration date: 21-May-2010
Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine
Locus Tag PrefixHMPREF9548
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)628
WGS master1
SRA Experiments1
Protein Sequences5317
Other datasets
BioSample1
Assembly1
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes253

Supplemental Content

Related information

LinkOut to external resources

Recent activity

Clear Turn Off Turn On
  • Escherichia coli MS 182-1
    Escherichia coli MS 182-1
    Demonstration Project Reference Genome for Human Microbiome Project
    BioProject
  • soil metagenome
    soil metagenome
    Enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0898-MG metagenome
    BioProject
  • Acytostelium subglobosum LB1
    Acytostelium subglobosum LB1
    A. subglobosum genome sequencing
    BioProject
  • sediment metagenome
    sediment metagenome
    Sediment bacterial 16S in Hachiro polder.
    BioProject
  • salt lake metagenome
    salt lake metagenome
    Sorted cell/s from Organic Lake upper layer water, Antarctica - Uncultured microbe JGI OrgLkO2.SYBR.01.K17 metagenome
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center