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Accession: PRJNA47259 ID: 47259

Escherichia coli MS 16-3

Demonstration Project Reference Genome for Human Microbiome Project

See Genome Information for Escherichia coli
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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)
This project is a component of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP)
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7503 additional projects are related by organism.
2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).
28 additional projects are components of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP).

This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).

AccessionPRJNA47259
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismEscherichia coli MS 16-3[Taxonomy ID: 749542]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli MS 16-3
SubmissionRegistration date: 21-May-2010
Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine
Locus Tag PrefixHMPREF9545
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)557
WGS master1
SRA Experiments3
Protein Sequences5291
Other datasets
BioSample1
Assembly1
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes318

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