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Accession: PRJNA472398 ID: 472398

Bacteria

Single cell genomes and metagenomic pan genomes of oral bacteria from candidate division TM7 (Saccharibacteria) Genome sequencing and assembly

Genomic sequencing of uncultured oral TM7 bacteria, based on single cells and cell populations (metagenomes)
AccessionPRJNA472398
Data TypeGenome sequencing and assembly
ScopeMultispecies
Grants
  • "Culturing of the uncultured: reverse genomics and multispecies consortia in oral" (Grant ID R01 DE024463, National Institute of Dental and Craniofacial Research)
SubmissionRegistration date: 5-Aug-2019
Oak Ridge National Laboratory
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1256
WGS master23
SRA Experiments15
Protein Sequences14049
Other datasets
BioSample35
Assembly23
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
13
10
23
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_007845555.1ScaffoldSDSA00000000SAMN10782551
TM7_HOT_346-SAG1
TM7 phylum sp. oral taxon 346
GCA_007845535.1ScaffoldSDRY00000000SAMN10782553
TM7_HOT_346-SAG3
TM7 phylum sp. oral taxon 346
GCA_007845545.1ScaffoldSDRZ00000000SAMN10782552
TM7_HOT_346-SAG2
TM7 phylum sp. oral taxon 346
GCA_007845485.1ScaffoldSDRW00000000SAMN10782555
TM7_HOT_348-SAG2
TM7 phylum sp. oral taxon 348
GCA_007845495.1ScaffoldSDRX00000000SAMN10782554
TM7_HOT_348-SAG1
TM7 phylum sp. oral taxon 348
GCA_007845445.1ScaffoldSDRU00000000SAMN10782557
TM7_HOT_348-SAG4
TM7 phylum sp. oral taxon 348
GCA_007845435.1ScaffoldSDRV00000000SAMN10782556
TM7_HOT_348-SAG3
TM7 phylum sp. oral taxon 348
GCA_007845455.1ScaffoldSDRT00000000SAMN10782558
TM7_HOT_349-SAG1
TM7 phylum sp. oral taxon 349
GCA_007845205.1ScaffoldSDRK00000000SAMN10782568
TM7_HOT_350-SAG1
TM7 phylum sp. oral taxon 350
GCA_007845185.1ContigSDRI00000000SAMN10782570
TM7_HOT_351-SAG2
TM7 phylum sp. oral taxon 351
GCA_007845195.1ContigSDRJ00000000SAMN10782569
TM7_HOT_351-SAG1
TM7 phylum sp. oral taxon 351
GCA_007845135.1ContigSDRG00000000SAMN10782572
TM7_HOT_351-SAG4
TM7 phylum sp. oral taxon 351
GCA_007845165.1ContigSDRH00000000SAMN10782571
TM7_HOT_351-SAG3
TM7 phylum sp. oral taxon 351
GCA_007845365.1ScaffoldSDRR00000000SAMN10782560
TM7_HOT_352-SAG2
TM7 phylum sp. oral taxon 352
GCA_007845395.1ScaffoldSDRS00000000SAMN10782559
TM7_HOT_352-SAG1
TM7 phylum sp. oral taxon 352
GCA_007845345.1ContigSDRP00000000SAMN10782562
TM7_HOT_352-SAG4
TM7 phylum sp. oral taxon 352
GCA_007845355.1ContigSDRQ00000000SAMN10782561
TM7_HOT_352-SAG3
TM7 phylum sp. oral taxon 352
GCA_007845275.1ContigSDRN00000000SAMN10782565
TM7_HOT_352-SAG7
TM7 phylum sp. oral taxon 352
GCA_007845325.1ContigSDSB00000000SAMN10782563
TM7_HOT_352-SAG5
TM7 phylum sp. oral taxon 352
GCA_007845265.1ContigSDRM00000000SAMN10782566
TM7_HOT_352-SAG8
TM7 phylum sp. oral taxon 352
GCA_007845295.1ContigSDRO00000000SAMN10782564
TM7_HOT_352-SAG6
TM7 phylum sp. oral taxon 352
GCA_007845255.1ScaffoldSDRL00000000SAMN10782567
TM7_HOT_353-SAG1
TM7 phylum sp. oral taxon 353
GCA_007845105.1ScaffoldSDRF00000000SAMN10782573
TM7_HOT_356-SAG1
TM7 phylum sp. oral taxon 356
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes185

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