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Accession: PRJEB26586 ID: 472290

Insights into the population structure and pan-genome of Haemophilus influenzae

The human-restricted bacterium Haemophilus influenzae is responsible for respiratory infections in both children and adults. More...
AccessionPRJEB26586
Data TypeGenome sequencing and assembly
ScopeMonoisolate
PublicationsPinto M et al., "Insights into the population structure and pan-genome of Haemophilus influenzae.", Infect Genet Evol, 2019 Jan;67:126-135
SubmissionRegistration date: 21-May-2018
NATIONAL INSTITUTE OF HEALTH DR. RICARDO JORGE
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4140
WGS master88
SRA Experiments88
Publications
PubMed1
Other datasets
BioSample88
Assembly88
Assembly details:
Assembly levelNumber of Assemblies
88
88
AssemblyLevelWGSBioSampleTaxonomy
GCA_900407765.1ContigUEVF00000000SAMEA4643512
GCA_900407775.1ContigUEVQ00000000SAMEA4643511
GCA_900407825.1ContigUEVB00000000SAMEA4643510
GCA_900407795.1ContigUEVR00000000SAMEA4643509
GCA_900407785.1ContigUEVL00000000SAMEA4643508
GCA_900407695.1ContigUEVS00000000SAMEA4643507
GCA_900407725.1ContigUEVC00000000SAMEA4643506
GCA_900407705.1ContigUEUZ00000000SAMEA4643505
GCA_900407715.1ContigUEVK00000000SAMEA4643504
GCA_900407755.1ContigUEVA00000000SAMEA4643503
GCA_900407745.1ContigUEVD00000000SAMEA4643502
GCA_900407735.1ContigUEVI00000000SAMEA4643501
GCA_900407675.1ContigUEVN00000000SAMEA4643500
GCA_900407685.1ContigUEVT00000000SAMEA4643499
GCA_900407655.1ContigUEVG00000000SAMEA4643498
GCA_900407625.1ContigUEVM00000000SAMEA4643497
GCA_900407645.1ContigUEUU00000000SAMEA4643496
GCA_900407635.1ContigUETW00000000SAMEA4643495
GCA_900407665.1ContigUEUV00000000SAMEA4643494
GCA_900407575.1ContigUEUK00000000SAMEA4643493
GCA_900407605.1ContigUEUA00000000SAMEA4643492
GCA_900407565.1ContigUETV00000000SAMEA4643491
GCA_900407585.1ContigUEUB00000000SAMEA4643490
GCA_900407555.1ContigUETY00000000SAMEA4643489
GCA_900407615.1ContigUEUD00000000SAMEA4643488
GCA_900407595.1ContigUEUW00000000SAMEA4643487
GCA_900407525.1ContigUEUM00000000SAMEA4643486
GCA_900407485.1ContigUEUF00000000SAMEA4643485
GCA_900407535.1ContigUEUY00000000SAMEA4643484
GCA_900407545.1ContigUEUP00000000SAMEA4643483
GCA_900407495.1ContigUEUL00000000SAMEA4643482
GCA_900407515.1ContigUEUR00000000SAMEA4643481
GCA_900407505.1ContigUEUS00000000SAMEA4643480
GCA_900407445.1ContigUEUI00000000SAMEA4643479
GCA_900407455.1ContigUEUX00000000SAMEA4643478
GCA_900407435.1ContigUEUJ00000000SAMEA4643477
GCA_900407415.1ContigUEUH00000000SAMEA4643476
GCA_900407465.1ContigUEUE00000000SAMEA4643475
GCA_900407425.1ContigUEUN00000000SAMEA4643474
GCA_900407475.1ContigUETU00000000SAMEA4643473
GCA_900407355.1ContigUEUQ00000000SAMEA4643472
GCA_900407345.1ContigUEUO00000000SAMEA4643471
GCA_900407405.1ContigUETZ00000000SAMEA4643470
GCA_900407375.1ContigUEUT00000000SAMEA4643469
GCA_900407385.1ContigUETX00000000SAMEA4643468
GCA_900407395.1ContigUEUC00000000SAMEA4643467
GCA_900407365.1ContigUEUG00000000SAMEA4643466
GCA_900408185.1ContigUEXC00000000SAMEA4643465
GCA_900408215.1ContigUEWP00000000SAMEA4643464
GCA_900408195.1ContigUEWZ00000000SAMEA4643463
GCA_900408205.1ContigUEWS00000000SAMEA4643462
GCA_900408165.1ContigUEWY00000000SAMEA4643461
GCA_900408125.1ContigUEWT00000000SAMEA4643460
GCA_900408115.1ContigUEXB00000000SAMEA4643459
GCA_900408145.1ContigUEWV00000000SAMEA4643458
GCA_900408135.1ContigUEWQ00000000SAMEA4643457
GCA_900408155.1ContigUEWO00000000SAMEA4643456
GCA_900408175.1ContigUEWX00000000SAMEA4643455
GCA_900408085.1ContigUEWN00000000SAMEA4643454
GCA_900408095.1ContigUEWI00000000SAMEA4643453
GCA_900408105.1ContigUEWD00000000SAMEA4643452
GCA_900408065.1ContigUEWJ00000000SAMEA4643451
GCA_900408075.1ContigUEWF00000000SAMEA4643450
GCA_900408045.1ContigUEWM00000000SAMEA4643449
GCA_900408055.1ContigUEWG00000000SAMEA4643448
GCA_900408005.1ContigUEWC00000000SAMEA4643447
GCA_900407975.1ContigUEXD00000000SAMEA4643446
GCA_900408025.1ContigUEWU00000000SAMEA4643445
GCA_900408035.1ContigUEWH00000000SAMEA4643444
GCA_900408015.1ContigUEWK00000000SAMEA4643443
GCA_900407985.1ContigUEWL00000000SAMEA4643442
GCA_900407995.1ContigUEWE00000000SAMEA4643441
GCA_900407925.1ContigUEWR00000000SAMEA4643440
GCA_900407915.1ContigUEVU00000000SAMEA4643439
GCA_900407935.1ContigUEWA00000000SAMEA4643438
GCA_900407955.1ContigUEVZ00000000SAMEA4643437
GCA_900407965.1ContigUEVW00000000SAMEA4643436
GCA_900407905.1ContigUEVV00000000SAMEA4643435
GCA_900407945.1ContigUEXA00000000SAMEA4643434
GCA_900407845.1ContigUEVY00000000SAMEA4643433
GCA_900407875.1ContigUEVX00000000SAMEA4643432
GCA_900407885.1ContigUEVO00000000SAMEA4643431
GCA_900407895.1ContigUEVJ00000000SAMEA4643430
GCA_900407865.1ContigUEVH00000000SAMEA4643429
GCA_900407835.1ContigUEWW00000000SAMEA4643428
GCA_900407855.1ContigUEVP00000000SAMEA4643427
GCA_900407815.1ContigUEVE00000000SAMEA4643426
GCA_900407805.1ContigUEWB00000000SAMEA4643425
SRA Data Details
ParameterValue
Data volume, Gbases13
Data volume, Mbytes7735

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