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Accession: PRJNA472204 ID: 472204

soil metagenome

Impacts of DNA extraction method and PCR variability on metabarcoding estimates of soil biodiversity

We investigated the impacts of DNA extraction method and PCR variability on DNA metabarcoding estimates of soil biodiversity for multiple taxonomic groups (bacteria, fungi, protists, and metazoans).
AccessionPRJNA472204
Data TypeRaw sequence reads, Targeted loci environmental
ScopeEnvironment
Organismsoil metagenome[Taxonomy ID: 410658]
unclassified sequences; metagenomes; ecological metagenomes; soil metagenome
Grants
  • "New Zealand Tertiary Education Commission" (Grant ID -, Centre of Research Excellence funding for the Allan Wilson Centre for Molecular Ecology and Evolution)
SubmissionRegistration date: 20-May-2018
University of Auckland
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments80
Other datasets
BioSample128
SRA Data Details
ParameterValue
Data volume, Gbases6
Data volume, Mbytes3652

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