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Accession: PRJNA472080 ID: 472080

Bisulfite (methylome) sequencing of msh1 memory line treated with 5-azacytidine in Arabidopsis (thale cress)

See Genome Information for Arabidopsis thaliana
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This project is a component of the FAIRE-seq and Bisulfite-seq of Arabidopsis wild type and msh1 memory line
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1 additional project is a component of the FAIRE-seq and Bisulfite-seq of Arabidopsis wild type and msh1 memory line.
5935 additional projects are related by organism.
Germination of the memory line and isogenic Col-0 wild type on media containing 100 uM 5-azacytidine alleviated the phenotype differences between the two lines, resulting in similar growth rates. More...
AccessionPRJNA472080; GEO: GSE114665
Data TypeEpigenomics
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsYang X et al., "Segregation of an MSH1 RNAi transgene produces heritable non-genetic memory in association with methylome reprogramming.", Nat Commun, 2020 May 5;11(1):2214
SubmissionRegistration date: 18-May-2018
The Pennsylvania State University
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RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2218
SRA Data Details
ParameterValue
Data volume, Gbases62
Data volume, Mbytes23891

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