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Accession: PRJNA471905 ID: 471905

Tick metagenome

Tick metagenome Raw sequence reads

To investigate the effects of environmental temperature on tick microbiome, colony-reared Ixodes scapularis ticks incubated (up to 10 days) at different temperatures (4ºC, 20ºC, 30ºC and 37ºC) at a constant relative humidity of >80% in a controlled lab setting were analyzed for their bacterial profile using 16S V4 rRNA gene sequencing.
AccessionPRJNA471905
Data TypeRaw sequence reads
ScopeEnvironment
Organismtick metagenome[Taxonomy ID: 1595979]
unclassified sequences; metagenomes; organismal metagenomes; tick metagenome
SubmissionRegistration date: 17-May-2018
University of North Texas Health Science Center
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments90
Other datasets
BioSample90
SRA Data Details
ParameterValue
Data volume, Gbases7
Data volume, Mbytes4393

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