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Accession: PRJNA471188 ID: 471188

Composition of the Colonic Mesenchyme and the Nature of its Plasticity in Inflammatory Bowel Disease

10x Chromium single cell RNA-Seq of colonic mesenchyme cell populations in health and Ulcerative Colitis in human patients and health in DSS-induced colitis in murine colon Overall design: Cells from colon of three healthy mice and 3 DSS-treated mice were sequenced on 10x Chromium /hiSeq4000 instruments. More...
AccessionPRJNA471188; GEO: GSE114374
Data TypeTranscriptome or Gene expression
ScopeMultispecies
PublicationsKinchen J et al., "Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel Disease.", Cell, 2018 Oct 4;175(2):372-386.e17
SubmissionRegistration date: 13-May-2018
The MRC Weatherall Institute of Molecular Medicine, University of Oxford
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments10
Publications
PubMed1
PMC1
Other datasets
BioSample10
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes337
SRA Data Details
ParameterValue
Data volume, Gbases183
Data volume, Mbytes81150

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