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Accession: PRJNA471073 ID: 471073

small RNA profiling of extracellular RNA from breast cancer cell lines (human)

See Genome Information for Homo sapiens
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This project is a component of the Discovery and annotation of intracellular and extracellular orphan non-coding RNAs in breast cancer
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3 additional projects are components of the Discovery and annotation of intracellular and extracellular orphan non-coding RNAs in breast cancer.
66644 additional projects are related by organism.
We performed small RNA sequencing of conditioned media collected from breast cancer cells as well as human mammary epithelial cells (HUMEC) in biological replicates. More...
AccessionPRJNA471073; GEO: GSE114327
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsFish L et al., "Cancer cells exploit an orphan RNA to drive metastatic progression.", Nat Med, 2018 Nov;24(11):1743-1751
SubmissionRegistration date: 10-May-2018
Columbia University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments18
Publications
PubMed1
PMC1
Other datasets
BioSample18
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases5
Data volume, Mbytes1755

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