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1 additional project is a component of the In situ transcriptome characteristics are lost following culture adaptation of adult cardiac stem cells.
Single-cell RNA-seq (10X Genomics Chromium) to profile of cardiac progenitor cells, comparing the transcriptomes of freshly isolated and cultured cardiac progenitor cells
Overall design: Transcriptional profiling of freshly isolated CPCs and their cognate in vitro expanded derivatives was performed by scRNA-Seq approaches using 10X Genomics Chromium
| Accession | PRJNA471002; GEO: GSE114278 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus |
| Publications | - Monsanto MM et al., "Enhancing myocardial repair with CardioClusters.", Nat Commun, 2020 Aug 7;11(1):3955
- Kim T et al., "In situ transcriptome characteristics are lost following culture adaptation of adult cardiac stem cells.", Sci Rep, 2018 Aug 13;8(1):12060
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| Submission | Registration date: 10-May-2018
Sussman Lab, Biology, San Diego State University |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 2 |
| Publications |
| PubMed | 2 |
| PMC | 2 |
| Other datasets |
| BioSample | 2 |
| GEO DataSets | 1 |